Automated invoice processing 101: A guide for businesses

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  1. Introduction
  2. How does automated invoice processing work?
  3. Features of an effective automated invoice processing system
    1. Data capture
    2. Data validation and matching
    3. Approval workflows
    4. Integration
  4. Advantages of implementing automated invoice processing
  5. How to integrate automated invoice processing with other business systems
  6. Common challenges in automated invoice processing—and how to solve them
    1. Data extraction and accuracy
    2. Integration
    3. Change management and user adoption
    4. Exception handling and complex invoices
    5. Data security and compliance

Automated invoice processing means using software to automate the steps involved in handling invoices. This reduces the need for manual data entry and processing, and that can save time and minimize errors. In 2024, the invoice automation software market was valued at almost $3.4 billion and is estimated to reach $8.9 billion by 2031, a sign of the demand for this technology.

Below, we’ll cover how automated invoice processing works, features of an effective system, its advantages and common challenges, and how to integrate automated invoice processing with your other systems.

What’s in this article?

  • How does automated invoice processing work?
  • Features of an effective automated invoice processing system
  • Advantages of implementing automated invoice processing
  • How to integrate automated invoice processing with other business systems
  • Common challenges in automated invoice processing—and how to solve them

How does automated invoice processing work?

Automated invoice processing uses a combination of software and digital workflows to manage invoices with minimal human intervention. Here’s how this process typically works:

  • Invoice receipt: Invoices are received in various formats, including electronic (e.g., PDFs) and on paper. All incoming invoices are aggregated into a central processing system.

  • Data capture: The data from electronic invoices is directly integrated with the processing system using formats such as extensible markup language (XML) or electronic documents interchange (EDI). For nonelectronic invoices, technologies such as optical character recognition (OCR) or intelligent document recognition (IDR) scan and convert the text into digital data. Advanced systems use machine learning to recognize different invoice layouts and improve the accuracy of their data capture process over time.

  • Data validation and verification: The extracted data (e.g., vendor details, invoice number, line items) is automatically verified against internal data sources such as purchase orders and goods received notes. The system checks for discrepancies, duplicates, and compliance with contractual terms.

  • Approval routing: Once the data is validated, the invoice is forwarded to the relevant stakeholders for approval. This forwarding system is based on predefined rules, which can be set according to the invoice amount, vendor, or department.

  • Exception handling: If an invoice fails to match a purchase order or if there are discrepancies, the system flags it for manual review. Exception handling mechanisms let staff intervene, correct data, or seek additional clarification before proceeding.

  • Payment execution: After approval, the invoice details are processed for payment. Automated systems can schedule payments, helping businesses adhere to vendors’ payment terms or take advantage of early payment discounts. Integration with banking systems or payment gateways facilitates automated payment processing.

  • Integration and reconciliation: The processed data is integrated into accounting systems or enterprise resource planning (ERP) software for real-time financial reporting and reconciliation.

  • Analytics and reporting: Analytics tools provide insights into spending patterns, supplier performance, and efficiency. This data can be used to identify potential savings and improvements to be made and inform decision-making.

Features of an effective automated invoice processing system

Invoice processing systems can come with myriad features. Here are some of the key features you should look for:

Data capture

  • OCR: The ability to extract data from various invoice formats (e.g., PDF, scanned images, emails)

  • Machine learning: The software can learn and adapt to different invoice layouts and data fields

  • Template management: Lets users create and customize templates for specific vendor invoices

Data validation and matching

  • Three-way matching: The ability to compare invoice data with purchase orders and receipts to detect discrepancies

  • Duplicate invoice detection: Identify and flag duplicate invoices to prevent overpayments

  • Business rules engine: Lets users define custom rules for invoice validation and approval

Approval workflows

  • Automated routing: Routing invoices to the correct approvers based on predefined rules

  • Mobile approvals: Ability for approvers to review and approve invoices on mobile devices

  • Audit trails: A complete history of invoice approvals and changes

Integration

  • Accounting/ERP system integration: Automatic transfer of approved invoice data to the accounting or ERP system

  • Payment system integration: Automated payment processing of approved invoices

  • Application programming interface (API) integration: Integration with other business applications (e.g., procurement, contract management) via APIs

These advanced features can also be helpful for invoice processing:

  • Early payment discounts: The ability to identify opportunities for early payment discounts and automatically take advantage

  • Vendor management: A centralized database of vendor information and communications, including performance tracking

  • Analytics and reporting: Real-time dashboards and customizable reports for insights into invoice processing metrics

  • Exception handling: Ability to flag exceptions (e.g., missing data, price discrepancies) for manual review and resolution

  • Fraud detection: Uses machine learning algorithms to detect potentially fraudulent invoices

  • Cloud-based deployment: A flexible software solution that allows for remote access

Advantages of implementing automated invoice processing

Automated invoice processing can bring numerous benefits for your business. Here are some of the potential advantages:

  • Operational agility: Automated invoice processing can adapt to numerous invoice formats and compliance requirements and use machine learning algorithms to continuously improve data extraction and validation processes.

  • Supply chain and procurement integration: These systems can integrate with supply chain and procurement software, creating real-time visibility into the impact of accounts payable on supply chain operations, facilitating just-in-time inventory practices, and fine-tuning working capital management.

  • Financial forecasting and liquidity management: Automated systems’ real-time processing and analytics capabilities give chief financial officers (CFOs) and financial controllers immediate insights into cash flow status and financial commitments. This lets them better predict cash requirements and make key investment decisions.

  • Fraud detection and risk mitigation: Advanced automated invoice processing systems have sophisticated anomaly detection capabilities to identify potential fraud or discrepancies. Businesses can set trigger alerts for abnormal activities such as duplicate payments or invoices that deviate from contract terms, letting businesses proactively manage risk.

  • Customizable workflows: Businesses can set custom approval hierarchies and workflow rules for specific control requirements. This ensures transactions undergo the appropriate level of scrutiny and enforces compliance.

  • Vendor management: Automated systems capture and analyze vendor data, helping procurement teams identify and negotiate with reliable vendors using performance trends.

  • Global compliance: Multinational corporations must comply with many international financial regulations and tax laws. Automated systems designed for global compliance can automatically adjust to different regulatory environments, reducing the burden on local teams.

  • Meeting environmental, social, and governance (ESG) goals: Automated systems reduce paper use, improve process efficiency, and collect valuable data for reporting on ESG criteria, particularly in governance and environmental impact.

How to integrate automated invoice processing with other business systems

To maximize effectiveness, integrate your automated invoice processing with your other business systems. Here’s how to get started:

  • Set clear goals: Understand exactly what you want from integrating your invoice processing with other systems. This could be faster data access, improved accuracy, or better reporting capabilities.

  • Choose the right tools: Pick tools that connect different systems. Middleware acts as a bridge between systems, while APIs let systems communicate with each other directly. Choose one based on your needs and its compatibility with your systems.

  • Map out data and workflows: Determine what information needs to be shared between systems (e.g., invoice and payment details), and make sure they match up correctly. Understand how the data moves and is used across your systems to make sure the integration supports your processes.

  • Focus on compliance and security: Make sure the integration complies with legal standards relevant to your industry, especially data protection laws. Implement security measures such as data encryption and secure data transmission to protect sensitive information.

  • Test thoroughly: Extensively test new integrations to confirm everything works as expected without errors. Let customers test the system to confirm it meets their daily needs and is user-friendly.

  • Implement gradually and monitor: Start with a small rollout, perhaps in one department, before expanding. This lets you address issues on a smaller scale first. After full implementation, continuously monitor the system for any problems, and make adjustments as necessary.

Common challenges in automated invoice processing—and how to solve them

Automated invoice processing can sometimes present challenges for businesses, including low user adoption and data security. Here’s an overview of common challenges and their solutions:

Data extraction and accuracy

Invoices come in varying formats (e.g., PDF, scanned images, emails) and layouts, making data extraction difficult. OCR technology might struggle with poor quality scans or handwritten invoices, and inaccurate data extraction can lead to errors.

Solutions

  • Advanced OCR and machine learning: Implement artificial intelligence (AI)-powered OCR solutions that use machine learning to improve accuracy over time.

  • Template management: Create custom templates for frequently received invoices to make data extraction easier.

  • Human-in-the-loop validation: Incorporate a validation step in which humans can review and correct data in complicated or ambiguous cases.

Integration

Legacy systems might not have modern APIs or compatible data formats, making integration challenging. Data inconsistencies between systems can lead to errors and delays.

Solutions

  • Middleware: Use middleware platforms to bridge the gap between different systems and facilitate data mapping and transformation.

  • Custom integrations: Develop custom integrations using APIs or file-based transfers for easier data exchange.

  • Data cleansing and standardization: Implement data cleansing and standardization processes for consistency across systems.

Change management and user adoption

Employees might resist change or be unfamiliar with the new system, leading to low adoption rates. Lack of training and support can hinder successful implementation.

Solutions

  • Change management plan: Develop a comprehensive change management plan that includes communication, training, and ongoing support.

  • Phased rollout: Gradually introduce automated invoice processing to different departments or teams to allow for adjustments and feedback.

  • Incentivize adoption: Recognize and reward employees who embrace the new system and demonstrate proficiency.

Exception handling and complex invoices

Not all invoices can be fully automated because of exceptions such as missing data, pricing discrepancies, or complex approval rules. Manual intervention can slow the process and create bottlenecks.

Solutions

  • Exception workflow: Design a clear workflow for handling exceptions to promptly escalate and resolve issues.

  • Rule-based automation: Use rule-based automation to handle common exceptions such as matching invoices with purchase orders or applying default general ledger codes.

  • Human-in-the-loop review: For complicated or high-value invoices, include a review step with an experienced staff member.

Data security and compliance

Invoice data often contains sensitive financial information that must be protected from unauthorized access—for the sake of customers and to comply with data protection regulations.

Solutions

  • Security measures: Implement strong access controls, encryption, and regular security audits to keep invoice data safe.

  • Data privacy compliance: Ensure compliance with relevant data protection regulations by obtaining the necessary consents, anonymizing data whenever possible, and limiting access to authorized personnel.

  • Vendor due diligence: Carefully vet automated invoice processing vendors for strong security practices and compliance with industry standards.

The content in this article is for general information and education purposes only and should not be construed as legal or tax advice. Stripe does not warrant or guarantee the accurateness, completeness, adequacy, or currency of the information in the article. You should seek the advice of a competent attorney or accountant licensed to practice in your jurisdiction for advice on your particular situation.

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